Season 1

Conan, Ran, and Kogoro are riding a bonnet bus, driven by bus operator Mamoru Kajita and guided by Touko Natsume, through the mountains. On the bus already is the president of the Kagekura youth club, Takurou Yabe. The bus stops to pick up other travelers including Souchiki Okumura, who forces Kogoro out of his seat. He argues with Yabe then drinks from his water bottle and collapses dead from poison.

Ran reveals that the person who ran past her after Funaki was killed was Yabe. Kogoro catches him but Yabe maintains his innocence.

Mouri, Ran, and Conan are staying at a hotel where they meet the twins from the case of the cursed mask. Later, an actress comes and causes trouble. The next day, she is found hanged in her room.

Conan notices that this is not a suicide but a murder. He later proves that the culprit hang-glided to the hotel and went back by stowing in the trunk of a car.

A serial arsonist sets huge fires across the city and Takagi and Miwako with the Detective Boys are out to solve it.

After Ai reveals the pattern of the arsonist attack, Ayumi, Genta, and Mitsuhiko run into the arsonist who attempts to kill them.

Kogoro is carried by Ran and accompanied by Conan one night picking him up from a bar. While walking they witness a fight in an apartment. The next day a murder occurs. One of the man who's heard arguing comes to Moore for help to prove his innocence. The man has made good suggestions on where to find evidence which are in fact too good.

Kogoro, Ran, and Conan are invited for a ceremony for a ropeway which is built through a giant Goddess Statue on the mountains by Doumouto Guze. They learn that there is a rumour about a curse by the goddess' anger and Kogoro was invited to disprove it. After riding through the ropeway on the opening day, Doumouto, who has disappeared from the ropeway cart, is later found dead on the goddess' hand.

The Detective Boys excluding Ai, are traveling through a winding path on Mt Ryushin. There they witness a derailed car fall off the mountain. The man has died and through the evidence, Conan concludes another car rammed into that car.

Kogoro, Ran, and Conan came as the substitutes for Serena and her father, the Suzuki president, and decided to attend a tea meeting at the Aonogi house. At the backyard of the mansion, there was a pond that shined in five colors. And there was a bridge which led to the tea room. While they were enjoying the pond’s colors something unusual happened… The headmaster died in the tea room, the same way as the legend.

Conan searches for clues to who murdered the Headmaster busily and finally figures out the trick that was used.

The Detective Boys decided to go mushroom picking in the mountains. And during it, Genta got lost in the hunting area.

Ai deduces that if they reveal themselves, the hunter trying to get rid of them will shoot them and say that he thought they were bears. So Ai and Mitsuhiko leave a clue for Conan in the form of different types of mushrooms that tells him who the killer is.

Kogoro, Ran, and Conan are attending a dolphin show when a murder occurs in the hotel.

While Kogoro, Ran, and Conan are driving near the ocean, their car breaks down, prompting them to ask for help at a house which belongs to famous lawyer Kensuke Tachibana. There, they meet secretary Yuuichi Sakuraba, his caretaker Yaeko Kamei, his wife Yuki Tachibana, his office's accountant Noriko Sugimura, and lawyer Fumio Fujisawa. As the day progresses, Kensuke explains to Kogoro that he’s been receiving threatening letters from someone with the initials “T.K.”

Conan believes that Kumada was met with foul play. Conan puts Kogoro to sleep, deducing that the killer drugged Kensuke while he was out with Kumada.

The police inform Kogoro about a serial offender attacking women wearing ganguro makeup. According to the victims’ testimony, their attacker stood at 150 centimeters tall. Kogoro mentions a similar case 20 years ago where female high school students were run over, shocking Megure.

Megure reveals a case in the past which is why he was so anxious.

Kogoro receives a strange invitation to join a gathering at a countryside manor. Five other detectives are also in attendance — until one is murdered.

Conan becomes suspicious of Kogoro's latest client, a woman looking for an old lover, even more so when a murdered man is found clutching a photo of her.

After a thorough investigation, Conan tranquilizes Kogoro and reveals the culprit.

Conan, along with Heiji, Ran, and Kazuha travel the Isle of Mermaids looking for Saori Kadowaki, who had sent a letter to Heiji asking him to save her from being killed by a mermaid.

Conan and Heiji investigate Naoko's brutal murder and discover a trail of fish scales that suggest Naoko's killer came from the sea.

With Kogoro stunned, Conan clears the suspects who were accused of murder, then explains that each victim was called out by the person they trusted and was lured with the promise of a personal gain before being murdered, and reveals the killer.

A boy named Rintaro asks the Detective Boys to investigate on a strange man named Yuuji Kamekura. Rintaro explains that Yuuji appeared one day at his family restaurant claiming he owes Rintaro's grandfather a favor and would like to work at the restaurant. Yuuji soon after begins living with the family and helps them improve the restaurant to the point the family are constantly busy with the customers.

While at an arcade, Ran, Sonoko and Conan run into their English teacher, who recommends a virtual fighting game. But one player’s fun ends in death.

Forensics show that Bito was injected with poison, but the murder weapon is still missing. Conan identifies an odd sound crucial to solving the case.

Ran, Sonoko, and Conan attend Muneyuki Mino's pottery class to make pretty mugs. Muneyuki is pleased to see Ran as her father Kogoro solved a murder case at The Forgemaster's estate. Later on, Muneyuki displays a dark personality.

Conan finds something suspicious about the pendant on the necktie and figures out Muneyuki and his methods.

On the way on to a ski trip, Ai is terrified when she senses the Black Organization's presence.

Conan and his friends are on a hijacked bus. Conan suspects an accomplice among the passengers.

Mouri Kogoro accepts a case to help to find out who has been sending threatening phone calls and letters to a man named Mitsuo Yoshimura. On the way to Yoshimura's apartment with his friend Joji Ueda, Kogoro and Conan witness Yoshimura fall to his death.

Agasa takes the Detective Boys to a neighbor named Teruya Kanou who is giving away his belongings before moving to England. While there Kanou's Papillon goes missing when the longcase clock strikes twelve and chimes twelve times.

Conan notices that there is glass wool, which muffles sound, in the incinerator and realizes who the culprit is.

Kogoro, Ran, and Conan are invited to a private party by a President of a financial business, who is known for his expensive collection and various tastes in wine.

Ran, Kogoro, and Conan go to Shirahama on a vacation they won from a shopping district lottery, and there meet a group of college students named Maki Shinjou, Tatsuhiko Yura, Madoka Mitsui, Kanako Miyahara, and Kouta Fuji. They are all in the same art club, but don't seem to get along well.

Conan investigates and finds out that Madoka was cheating on her boyfriend with another student, Fuji, but that none of them committed the murder.

Heiji invites Kogoro, Ran, and Conan to a celebration of the opening of the 3K restaurant by three American celebrities, a heavyweight boxing champion named Ricardo Barreira, a Major League Baseball player named Mike Norwood, and the pro soccer player known named Ray Curtis who Conan admires.

As Heiji is investigating the rooms, Conan suddenly appears and talks to him about that all three sport celebrities are all innocent.

While traveling home on the Shinkansen from Osaka, Conan, Ran and Kogoro ran into Officer Satou and Takagi, who were transporting a criminal. Later, a bomb was found on the train that Officer Satou went to investigate.

From the crime scene, Conan found a suspicious thing that makes the scene as the place of homicide. During the investigation, Conan observes three suspects. Conan points out the suspects of who the murderer is. After investigating and finding clues, Conan reveals the culprit.

Genta has been acting weird at school lately. The Detective Boys learns that he is being targeted by a killer. Genta tries to remember where he sees the killer.

Tatsuo Mori, a Mori Kogoro impersonator, arrives at the Aoiya Hotel near a creepy forest where he is invited to investigate a case where a long-haired man is said to have committed suicide 4-5 years ago.

After analyzing the clues and facts, Conan is convinced that the long-haired man and Tatsuo were murdered.

Conan, Kogoro and Ran all go to an isolated mansion called the Sunflower building because every 12 hours it rotates. They are having a BBQ outside while the owner is inside when they hear a shot fired. They rush inside to find the owner shot through the forehead.

Professor Agasa takes the Detective Boys and Conan at the beach during school break while Ran and Sonoko also happen to be on the exact beach. At night, all of them ate dinner in a hotel together with the lifeguards they met that morning. The man the lifeguards were supposed to meet didn't show up so they tried calling him but the only sound that could be heard was the sound of the waves.

Conan figures out the culprit and decides to use Professor Agasa's voice to reveal the trick but remembers he forgot his voice changing bow tie at the hotel.

While Conan, Ran and Kogoro are going sightseeing, the village head is killed by the somebody who visited the village head before post office lady.

Ran and Kogoro get an invitation for an engagement party from his favorite idol Youko-chan. Kaoru the one who is getting engaged is another star and a former member of a group they all used to be in. She is a fan of Kogoro and wanted him to find out who was stalking her.

Megure searches everyone for the murder weapon but it isn't found. Though they discover a listening device and find drawers tampered with.

Because of Kogoro's love of horses he takes Conan and Ran to an OK corral ranch. One of their prize winning horses gets spooked and they all go running after her. They reach the horse and Conan finds blood on her horseshoe. They then find the farrier; one who shoes the horses, murdered.

Conan and the Detective Boys find out about a kidnapping case and decide to investigate.

Satou is having an arranged marriage meeting with a man due to her mother's persistence. She arrives to find out it's Ninzaburo Shiratori. She proposes that if Takagi does not arrive to her before sunset, she will marry him whether she wants to or not. He accepts, but Takagi is busy with a store robbery.

Takagi solves the case and arrests the culprit when he tries to make a dash out of the police car. Takagi catches up and gives up on going to Simone in time to stop the marriage as the sun is almost set and the car is too far away.

Kogoro wins a trip to Matsue from a lottery drawing, and while there they meet and join up with a Linked Verse group, which is a type of poetry. One of their members, a loan dealer, is killed, and Conan finds out that almost everyone has a motive to kill.

Conan hasn't figured out who the culprit is, so he gets Kogoro to participate in their Linked Verse Contest so he can have more time to observe the suspects.

Conan and the Detective Boys are out walking around the town the morning after an earthquake when they hear a scream. They see a woman cradling a man bleeding, and they call an ambulance and the man is saved. He says he was robbed and 200,000 yen ($2,000) was stolen from. They have a suspect, but he has an alibi of committing another crime when the man was attacked.

The Detective Boys shield a man after reporters mistake him for a wealthy arts patron. He offers them a thank-you lunch — but then kidnappers grab him.

As he tries to decipher a coded message James left at the crime scene, Conan realizes he can track him down using Ayumi's Detective Boys badge.

Conan, Kogoro, and Ran go to a restaurant that is shaking because of construction next door. They go back the next day only to find that the man running the restaurant is dead. At first it looks like the construction made a vase fall over and hit him on the head, killing the owner, however, the construction wasn't happening at the estimated time of death.

Conan, Kogoro, and Ran are driving to a hot spring when the road gets closed due to snow, and so they accept an offer of staying the night at a nearby house. The next day they discover the body of the company president dead and when they follow the footprints, they find his eldest son dressed up in armor and also dead in a locked room.

During the informal investigation, Conan discovers that the footprints of the armor in the snow were used to cover up the culprit's footprints, and finds that the locked room the son died in was set up.

Heiji invites Conan to his kendo tournament.

Eri Kisaki is the attorney for a man named Shinji Usami who is convicted for the murder of Tsuyoshi Hirasawa while in a drunken state. On the prosecution side is her rival, Reiko Kujo, dubbed “The Madonna of Prosecutors. During the hearing, Reiko calls Kogoro to the witness stand, leaving Eri baffled and Conan concerned.

Conan explains that Reiko is taking advantage of Eri’s history with Kogoro by using him on her side. Kameda confesses to changing the time on Kogoro’s phone, thus destroying Shinji’s alibi.

Sonoko invites Ran, bringing along Conan and Kogoro, to come to a house in the hills where their chocolates are blessed with good fortune for love.

Nigaki’s corpse is left to preserve evidence. Kogoro takes Nigaki’s recorder and camera to find leads but only discovers two completely black photos and one stained with blood. Apparently the murder takes place before the snowstorm but Conan feels like there's a trick to it.

Kogoro is tranquilized, and Conan reveals the culprit.

Hideo Morita has come forth to the agency asking Kogoro to find his late wife Mrs. Morita’s watch which he has lost in his house. Kogoro refuses the problem, but the Detective Boys and Dr. Agasa offer to help.

Conan does not think that Idetsuki was attacked by an outsider. The kids detect the scent of flowers coming from the microwave and Conan gets how the crime was committed. Using Agasa‘s voice, Conan reveals the murderer.

Ran, feeling she met the mysterious man before, attempts to remember why.

Conan's investigation leads him to discover the meaning of the symbols. He drops hints for Joseph Meguire to deduce what the symbols are.

The Detective Boys meet an old woman in the park who feeds and takes care of stray cats, and also likes to give the kids quizzes from a puzzle book she has. The next day she doesn't show up to feed the cats, but the cat Bruce comes with the old lady's scarf around his neck. The scarf has a code and blood on it, and to find and save the lady Conan and the gang must solve the puzzle.

Ran catches a cold and visits the doctor. When there one of the doctor's patients mentions that his apartment is haunted by a girl who was burned to death four years ago. Conan and Kogoro decide to investigate.

The three people excluding the old man are given more back story. One man does not believe in the ghost, one man is a horror movie filmer, and the other man just lives there.

Takagi loses his badge after breaking up a fight between a manager and his singer. He searches for it with the help of the Detective Boys.

When Professor Agasa learns that records related to Kogoro were stolen from the police department, he asks Heiji to come and help Conan investigate.

Unconvinced that Jodie’s neighbor willingly jumped to his death, Conan and Heiji are determined to find out what really happened in the apartment.

As the Detective Boys travel home from a soccer game on a crowded train, Conan witnesses a soccer fan suddenly collapse from a knife wound.

Despite the three suspects having been questioned, Conan still cannot deduce who is the culprit — until a televised soccer match gives him a clue.

The 3 Detective Boys are playing 'make-believe detectives' when they encounter a real case. A man is killed right in front of them, wrapped up in a sheet and thrown into a truck.

Kogoro, Conan, and Ran are driving in the mountains when they run out of gas and are kindly picked up by Majima, the president of a furniture company. Most of the people that work for him and live with him seem to hate him, so it isn't a surprise when Majima turns up dead the next morning in the beautiful house rock garden.

Kogoro accuses one of Majima's employees who was in debt, but is quickly proven wrong. He then accuses Endou, one of Majima's company managers.

Arguing with receptionist for free dinner ticket, one of movie director's crew invited Ran and her crews. However, the director man dies at a restaurant by cyanide but they are unable to find the source poison.

After the case is solved, Ran falls ill. To everyone's surprise, she falls from her chair and collapses on the floor, having memories of certain people she met a long time ago. These people include Sharon Vineyard and the mysterious man.

Ran loses consciousness due to her illness and reminisces about her past with Shinichi in New York.

The performance of The Golden Apple begins. During the climax of the musical, the actor Heath Flockhart, who is portraying Paris, is shot.

Shinichi tells his mother his deductions on the case to have her solve the murder.

Mitsuhiko is missing during the radio taiso day. The Detective Boys ask about his whereabouts from Mitsuhiko's sister and learn he had been going out to an unknown location for the past few Sundays.

Conan's radar runs out of power forcing the group to search for Mitsuhiko in the forest.

Heiji and Kogoro are invited to Okinawa to solve the case of a body that was found on Onikame Island alongside a mysterious carved message by the body.

Heiji tells them the Anchor he found was approximately four to five years old, the same time period on which the strange events have been occurring on Onikame.

When Conan and Heiji find the name "Kaa" and "Chi" written by Miyako many years ago, they realize who the names are referring to. Conan and Heiji have an epiphany and realize the culprit faked Tiara's time of death.

The Detective Boys along with Kogoro, Ran, and Sonoko take a trip to Kumamoto, Kumamoto so the Detective Boys may participate in a Tennis Tournament. While Sonoko is in the bathroom, Ran overhears three men planning to murder someone. To hide their conversation, the men kidnap Ran.

The police department receive a ransom demanding a large sum for Ran's life. The police send their men to search around town for Ran. Conan and Haibara soon deduce from Ran's description of her location.

Kazuyuki Kawai invites Kogoro, Ran, and Conan to his houseboat for dinner and to view the fireworks. During the fireworks, Kawai's guest, Tsuneo Yamasaki, is found dead from electrocution.

Kisaki found herself defending a burglar being charged by the state prosecutor with murder instead of manslaughter

Conan went along with Kogoro during the investigation.

Kogoro has won another contest and so he, Conan and Ran go on vacation, where four friends recognize him as the famous detective Kogoro Mouri. He has dinner with them, which is interrupted by a rude man trying to buy one of the friends' businesses, but they refuse to sell.

The rude man is found dead, hit on the head with a rock. Kogoro immediately suspects the four friends who all had motives, but when he questions them they all have alibis.